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Jinlong Zhang

Presentations (mainly in Chinese)

  • What is Phylogenetic Comparative Analysis (PDF, a Lesson for International course for postgraduates of Hainan University, Hainan, 2016)
  • Phylogenetic Comparative Methods and R Programming (PDF1, PDF2, PDF3, PDF4, Advanced Data Analysis Workshop using R, Changping, Beijing, 2016)
  • Two-day Workshop on Community Phylogenetics (PDF1, PDF2, Xishuangbanna Tropical Botanical Garden, Yunnan, China. 2014) 
  • Four day workshop Applied Statistics for Ecology and Evolution using R (Day1, Day2, Day3, Day4, R codes and data, Kunming Institute of Botany, Chinese Academy of Sciences, Yunnan, China. 2013) 
  • Ice Break of R: An Introduction to R statistical Programming Language (PDF, Kadoorie Farm and Botanic Garden, Hong Kong 2012)
  • Tutorials of Phylomatic and Phylocom (together with traits dendrograms) (PDF, Institute of Botany, Chinese Academy of Sciences, Beijing China 2011)
  • Evolutionary Ecology and R: An introduction to phylogenetic comparative methods (PDF, Renmin University, Beijing,China. 2011)
  • Phylogenetic tree inferences: from DNA sequences to divergence time (PDF, Institute of Botany, Chinese Academy of Sciences, Beijing , China2010)
  • Analyzing the evolution of niches: Principles and Methods (PDF, Xiamen Uinversity, Fujian, China 2010)
  • An introduction of R: statistical programming and plotting (PDF, Institute of Botany, Chinese Academy of Sciences, Beijing, China. 2010)

Tutorials  (in Chinese)

  • Geotagging of photos using exiftools and drawing distribution maps
  • R quick reference guide for phylogenetic comparative methods
  • ​Suggestions on the programming style in R
  • Phylomatic and Phylocom
  • Preparing labels for herbarium specimens
  • How to use git and Github
  • Managing R code on R-forge
  • How to do Kriging in R
  • Fitting Distributions in R
  • Writing R functions
  • How to create an R package
  • Create R package using Rcpp
  • Computing Moran's I and run SAC SAR models in R
  • What is Bootstrap?
  • MCMC and Metropolis Hastings
  • How to Compute Aspect, Slope, Convexity for forest plot?
  • Estimating the Parameters for a Linear Model using Likelihood, demo in R
  • Estimating the Parameters for a Linear Model using MCMC, demo in R
  • Tutorial for r8s
  • Tutorial for RAxML
  • Tutorial for BIOMOD
  • Tutorial for seqRFLP
  • How to Identify plants?
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